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        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.11+computecanada

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2021-12-13, 18:21 based on data in: /project/6003862/arteen/SociabilityRNA/fastqc/fastqc_noIndex


        General Statistics

        Showing 284/284 rows and 3/5 columns.
        Sample Name% Dups% GCM Seqs
        NS.1720.004.NEBNext_dual_i7_137---NEBNext_dual_i5_137.51_R1
        82.3%
        42%
        53.6
        NS.1720.004.NEBNext_dual_i7_137---NEBNext_dual_i5_137.51_R2
        82.3%
        43%
        53.6
        NS.1720.004.NEBNext_dual_i7_138---NEBNext_dual_i5_138.52_R1
        79.9%
        43%
        42.1
        NS.1720.004.NEBNext_dual_i7_138---NEBNext_dual_i5_138.52_R2
        80.4%
        44%
        42.1
        NS.1720.004.NEBNext_dual_i7_145---NEBNext_dual_i5_145.43_R1
        76.4%
        44%
        37.2
        NS.1720.004.NEBNext_dual_i7_145---NEBNext_dual_i5_145.43_R2
        77.3%
        45%
        37.2
        NS.1720.004.NEBNext_dual_i7_146---NEBNext_dual_i5_146.44_R1
        76.2%
        44%
        41.4
        NS.1720.004.NEBNext_dual_i7_146---NEBNext_dual_i5_146.44_R2
        77.6%
        45%
        41.4
        NS.1720.004.NEBNext_dual_i7_147---NEBNext_dual_i5_147.45_R1
        78.6%
        44%
        51.6
        NS.1720.004.NEBNext_dual_i7_147---NEBNext_dual_i5_147.45_R2
        78.9%
        45%
        51.6
        NS.1720.004.NEBNext_dual_i7_148---NEBNext_dual_i5_148.46_R1
        80.7%
        43%
        64.9
        NS.1720.004.NEBNext_dual_i7_148---NEBNext_dual_i5_148.46_R2
        80.5%
        44%
        64.9
        NS.1720.004.NEBNext_dual_i7_149---NEBNext_dual_i5_149.47_R1
        78.0%
        44%
        45.2
        NS.1720.004.NEBNext_dual_i7_149---NEBNext_dual_i5_149.47_R2
        78.2%
        45%
        45.2
        NS.1720.004.NEBNext_dual_i7_150---NEBNext_dual_i5_150.48_R1
        79.2%
        42%
        44.5
        NS.1720.004.NEBNext_dual_i7_150---NEBNext_dual_i5_150.48_R2
        79.1%
        43%
        44.5
        NS.1720.004.NEBNext_dual_i7_151---NEBNext_dual_i5_151.49_R1
        77.2%
        43%
        33.7
        NS.1720.004.NEBNext_dual_i7_151---NEBNext_dual_i5_151.49_R2
        78.2%
        44%
        33.7
        NS.1720.004.NEBNext_dual_i7_152---NEBNext_dual_i5_152.50_R1
        79.5%
        43%
        44.5
        NS.1720.004.NEBNext_dual_i7_152---NEBNext_dual_i5_152.50_R2
        80.1%
        44%
        44.5
        NS.1720.004.NEBNext_dual_i7_153---NEBNext_dual_i5_153.35_R1
        79.0%
        43%
        43.9
        NS.1720.004.NEBNext_dual_i7_153---NEBNext_dual_i5_153.35_R2
        78.9%
        44%
        43.9
        NS.1720.004.NEBNext_dual_i7_154---NEBNext_dual_i5_154.36_R1
        80.2%
        41%
        45.7
        NS.1720.004.NEBNext_dual_i7_154---NEBNext_dual_i5_154.36_R2
        80.7%
        42%
        45.7
        NS.1720.004.NEBNext_dual_i7_155---NEBNext_dual_i5_155.37_R1
        78.9%
        42%
        47.4
        NS.1720.004.NEBNext_dual_i7_155---NEBNext_dual_i5_155.37_R2
        79.3%
        43%
        47.4
        NS.1720.004.NEBNext_dual_i7_156---NEBNext_dual_i5_156.38_R1
        79.0%
        42%
        40.3
        NS.1720.004.NEBNext_dual_i7_156---NEBNext_dual_i5_156.38_R2
        78.3%
        43%
        40.3
        NS.1720.004.NEBNext_dual_i7_157---NEBNext_dual_i5_157.39_R1
        77.7%
        42%
        39.9
        NS.1720.004.NEBNext_dual_i7_157---NEBNext_dual_i5_157.39_R2
        78.7%
        43%
        39.9
        NS.1720.004.NEBNext_dual_i7_158---NEBNext_dual_i5_158.40_R1
        80.1%
        43%
        59.9
        NS.1720.004.NEBNext_dual_i7_158---NEBNext_dual_i5_158.40_R2
        79.8%
        44%
        59.9
        NS.1720.004.NEBNext_dual_i7_159---NEBNext_dual_i5_159.41_R1
        78.9%
        44%
        52.8
        NS.1720.004.NEBNext_dual_i7_159---NEBNext_dual_i5_159.41_R2
        79.7%
        45%
        52.8
        NS.1720.004.NEBNext_dual_i7_160---NEBNext_dual_i5_160.42_R1
        78.8%
        43%
        47.6
        NS.1720.004.NEBNext_dual_i7_160---NEBNext_dual_i5_160.42_R2
        79.2%
        44%
        47.6
        NS.1720.004.NEBNext_dual_i7_161---NEBNext_dual_i5_161.27_R1
        78.9%
        43%
        50.1
        NS.1720.004.NEBNext_dual_i7_161---NEBNext_dual_i5_161.27_R2
        79.1%
        43%
        50.1
        NS.1720.004.NEBNext_dual_i7_162---NEBNext_dual_i5_162.28_R1
        78.3%
        43%
        48.7
        NS.1720.004.NEBNext_dual_i7_162---NEBNext_dual_i5_162.28_R2
        78.6%
        44%
        48.7
        NS.1720.004.NEBNext_dual_i7_163---NEBNext_dual_i5_163.29_R1
        80.7%
        43%
        60.1
        NS.1720.004.NEBNext_dual_i7_163---NEBNext_dual_i5_163.29_R2
        81.6%
        44%
        60.1
        NS.1720.004.NEBNext_dual_i7_164---NEBNext_dual_i5_164.30_R1
        77.4%
        43%
        41.5
        NS.1720.004.NEBNext_dual_i7_164---NEBNext_dual_i5_164.30_R2
        78.4%
        44%
        41.5
        NS.1720.004.NEBNext_dual_i7_165---NEBNext_dual_i5_165.31_R1
        80.9%
        42%
        50.8
        NS.1720.004.NEBNext_dual_i7_165---NEBNext_dual_i5_165.31_R2
        80.1%
        44%
        50.8
        NS.1720.004.NEBNext_dual_i7_166---NEBNext_dual_i5_166.32_R1
        79.1%
        43%
        43.5
        NS.1720.004.NEBNext_dual_i7_166---NEBNext_dual_i5_166.32_R2
        79.5%
        44%
        43.5
        NS.1720.004.NEBNext_dual_i7_167---NEBNext_dual_i5_167.33_R1
        79.9%
        43%
        46.8
        NS.1720.004.NEBNext_dual_i7_167---NEBNext_dual_i5_167.33_R2
        80.4%
        44%
        46.8
        NS.1720.004.NEBNext_dual_i7_168---NEBNext_dual_i5_168.34_R1
        80.8%
        42%
        57.9
        NS.1720.004.NEBNext_dual_i7_168---NEBNext_dual_i5_168.34_R2
        80.3%
        44%
        57.9
        NS.1720.004.NEBNext_dual_i7_169---NEBNext_dual_i5_169.19_R1
        82.7%
        42%
        43.2
        NS.1720.004.NEBNext_dual_i7_169---NEBNext_dual_i5_169.19_R2
        81.5%
        44%
        43.2
        NS.1720.004.NEBNext_dual_i7_170---NEBNext_dual_i5_170.20_R1
        80.2%
        45%
        41.9
        NS.1720.004.NEBNext_dual_i7_170---NEBNext_dual_i5_170.20_R2
        80.4%
        46%
        41.9
        NS.1720.004.NEBNext_dual_i7_171---NEBNext_dual_i5_171.21_R1
        80.4%
        44%
        45.1
        NS.1720.004.NEBNext_dual_i7_171---NEBNext_dual_i5_171.21_R2
        81.0%
        45%
        45.1
        NS.1720.004.NEBNext_dual_i7_172---NEBNext_dual_i5_172.22_R1
        81.0%
        43%
        41.4
        NS.1720.004.NEBNext_dual_i7_172---NEBNext_dual_i5_172.22_R2
        81.5%
        45%
        41.4
        NS.1720.004.NEBNext_dual_i7_173---NEBNext_dual_i5_173.23_R1
        78.9%
        46%
        47.5
        NS.1720.004.NEBNext_dual_i7_173---NEBNext_dual_i5_173.23_R2
        79.5%
        47%
        47.5
        NS.1720.004.NEBNext_dual_i7_174---NEBNext_dual_i5_174.24_R1
        78.8%
        45%
        41.3
        NS.1720.004.NEBNext_dual_i7_174---NEBNext_dual_i5_174.24_R2
        79.4%
        46%
        41.3
        NS.1720.004.NEBNext_dual_i7_175---NEBNext_dual_i5_175.25_R1
        77.2%
        42%
        39.7
        NS.1720.004.NEBNext_dual_i7_175---NEBNext_dual_i5_175.25_R2
        77.8%
        43%
        39.7
        NS.1720.004.NEBNext_dual_i7_176---NEBNext_dual_i5_176.26_R1
        79.2%
        42%
        42.7
        NS.1720.004.NEBNext_dual_i7_176---NEBNext_dual_i5_176.26_R2
        79.3%
        43%
        42.7
        NS.1720.004.NEBNext_dual_i7_177---NEBNext_dual_i5_177.11_R1
        80.9%
        44%
        45.0
        NS.1720.004.NEBNext_dual_i7_177---NEBNext_dual_i5_177.11_R2
        81.5%
        45%
        45.0
        NS.1720.004.NEBNext_dual_i7_178---NEBNext_dual_i5_178.12_R1
        79.7%
        44%
        41.6
        NS.1720.004.NEBNext_dual_i7_178---NEBNext_dual_i5_178.12_R2
        80.6%
        45%
        41.6
        NS.1720.004.NEBNext_dual_i7_179---NEBNext_dual_i5_179.13_R1
        79.8%
        44%
        51.7
        NS.1720.004.NEBNext_dual_i7_179---NEBNext_dual_i5_179.13_R2
        80.7%
        45%
        51.7
        NS.1720.004.NEBNext_dual_i7_180---NEBNext_dual_i5_180.14_R1
        79.1%
        44%
        44.2
        NS.1720.004.NEBNext_dual_i7_180---NEBNext_dual_i5_180.14_R2
        79.8%
        45%
        44.2
        NS.1720.004.NEBNext_dual_i7_181---NEBNext_dual_i5_181.15_R1
        82.5%
        42%
        53.9
        NS.1720.004.NEBNext_dual_i7_181---NEBNext_dual_i5_181.15_R2
        82.0%
        43%
        53.9
        NS.1720.004.NEBNext_dual_i7_182---NEBNext_dual_i5_182.16_R1
        81.6%
        45%
        58.5
        NS.1720.004.NEBNext_dual_i7_182---NEBNext_dual_i5_182.16_R2
        82.3%
        46%
        58.5
        NS.1720.004.NEBNext_dual_i7_183---NEBNext_dual_i5_183.17_R1
        80.2%
        45%
        45.8
        NS.1720.004.NEBNext_dual_i7_183---NEBNext_dual_i5_183.17_R2
        79.5%
        46%
        45.8
        NS.1720.004.NEBNext_dual_i7_184---NEBNext_dual_i5_184.18_R1
        79.9%
        45%
        53.0
        NS.1720.004.NEBNext_dual_i7_184---NEBNext_dual_i5_184.18_R2
        80.9%
        46%
        53.0
        NS.1720.004.NEBNext_dual_i7_185---NEBNext_dual_i5_185.2_R1
        82.1%
        40%
        42.1
        NS.1720.004.NEBNext_dual_i7_185---NEBNext_dual_i5_185.2_R2
        81.8%
        42%
        42.1
        NS.1720.004.NEBNext_dual_i7_186---NEBNext_dual_i5_186.4_R1
        81.4%
        44%
        38.0
        NS.1720.004.NEBNext_dual_i7_186---NEBNext_dual_i5_186.4_R2
        81.6%
        45%
        38.0
        NS.1720.004.NEBNext_dual_i7_187---NEBNext_dual_i5_187.5_R1
        82.6%
        45%
        60.8
        NS.1720.004.NEBNext_dual_i7_187---NEBNext_dual_i5_187.5_R2
        82.8%
        47%
        60.8
        NS.1720.004.NEBNext_dual_i7_188---NEBNext_dual_i5_188.6_R1
        81.2%
        43%
        43.0
        NS.1720.004.NEBNext_dual_i7_188---NEBNext_dual_i5_188.6_R2
        81.2%
        44%
        43.0
        NS.1720.004.NEBNext_dual_i7_189---NEBNext_dual_i5_189.7_R1
        82.4%
        45%
        54.0
        NS.1720.004.NEBNext_dual_i7_189---NEBNext_dual_i5_189.7_R2
        82.3%
        46%
        54.0
        NS.1720.004.NEBNext_dual_i7_190---NEBNext_dual_i5_190.8_R1
        82.8%
        43%
        51.2
        NS.1720.004.NEBNext_dual_i7_190---NEBNext_dual_i5_190.8_R2
        82.8%
        45%
        51.2
        NS.1720.004.NEBNext_dual_i7_191---NEBNext_dual_i5_191.9_R1
        81.9%
        44%
        49.2
        NS.1720.004.NEBNext_dual_i7_191---NEBNext_dual_i5_191.9_R2
        83.1%
        45%
        49.2
        NS.1720.004.NEBNext_dual_i7_192---NEBNext_dual_i5_192.10_R1
        80.0%
        44%
        41.2
        NS.1720.004.NEBNext_dual_i7_192---NEBNext_dual_i5_192.10_R2
        79.8%
        45%
        41.2
        NS.1720.004.NEBNext_dual_i7_A1---NEBNext_dual_i5_A1.53_R1
        78.3%
        44%
        38.3
        NS.1720.004.NEBNext_dual_i7_A1---NEBNext_dual_i5_A1.53_R2
        79.0%
        45%
        38.3
        NS.1720.004.NEBNext_dual_i7_A2---NEBNext_dual_i5_A2.61_R1
        80.3%
        44%
        45.8
        NS.1720.004.NEBNext_dual_i7_A2---NEBNext_dual_i5_A2.61_R2
        80.9%
        45%
        45.8
        NS.1720.004.NEBNext_dual_i7_A3---NEBNext_dual_i5_A3.69_R1
        79.4%
        44%
        43.2
        NS.1720.004.NEBNext_dual_i7_A3---NEBNext_dual_i5_A3.69_R2
        80.6%
        45%
        43.2
        NS.1720.004.NEBNext_dual_i7_B1---NEBNext_dual_i5_B1.54_R1
        78.2%
        44%
        33.8
        NS.1720.004.NEBNext_dual_i7_B1---NEBNext_dual_i5_B1.54_R2
        78.5%
        45%
        33.8
        NS.1720.004.NEBNext_dual_i7_B2---NEBNext_dual_i5_B2.62_R1
        81.3%
        44%
        45.6
        NS.1720.004.NEBNext_dual_i7_B2---NEBNext_dual_i5_B2.62_R2
        81.9%
        45%
        45.6
        NS.1720.004.NEBNext_dual_i7_B3---NEBNext_dual_i5_B3.70_R1
        80.6%
        43%
        45.3
        NS.1720.004.NEBNext_dual_i7_B3---NEBNext_dual_i5_B3.70_R2
        80.8%
        44%
        45.3
        NS.1720.004.NEBNext_dual_i7_C1---NEBNext_dual_i5_C1.55_R1
        81.4%
        45%
        41.7
        NS.1720.004.NEBNext_dual_i7_C1---NEBNext_dual_i5_C1.55_R2
        81.3%
        46%
        41.7
        NS.1720.004.NEBNext_dual_i7_C2---NEBNext_dual_i5_C2.63_R1
        80.6%
        44%
        45.7
        NS.1720.004.NEBNext_dual_i7_C2---NEBNext_dual_i5_C2.63_R2
        81.6%
        45%
        45.7
        NS.1720.004.NEBNext_dual_i7_C3---NEBNext_dual_i5_C3.71_R1
        78.4%
        45%
        44.2
        NS.1720.004.NEBNext_dual_i7_C3---NEBNext_dual_i5_C3.71_R2
        80.2%
        46%
        44.2
        NS.1720.004.NEBNext_dual_i7_D1---NEBNext_dual_i5_D1.56_R1
        79.4%
        45%
        42.7
        NS.1720.004.NEBNext_dual_i7_D1---NEBNext_dual_i5_D1.56_R2
        80.3%
        46%
        42.7
        NS.1720.004.NEBNext_dual_i7_D2---NEBNext_dual_i5_D2.64_R1
        80.8%
        43%
        46.2
        NS.1720.004.NEBNext_dual_i7_D2---NEBNext_dual_i5_D2.64_R2
        81.8%
        44%
        46.2
        NS.1720.004.NEBNext_dual_i7_E1---NEBNext_dual_i5_E1.57_R1
        79.4%
        44%
        41.4
        NS.1720.004.NEBNext_dual_i7_E1---NEBNext_dual_i5_E1.57_R2
        80.8%
        45%
        41.4
        NS.1720.004.NEBNext_dual_i7_E2---NEBNext_dual_i5_E2.65_R1
        79.4%
        43%
        33.8
        NS.1720.004.NEBNext_dual_i7_E2---NEBNext_dual_i5_E2.65_R2
        79.8%
        44%
        33.8
        NS.1720.004.NEBNext_dual_i7_F1---NEBNext_dual_i5_F1.58_R1
        79.1%
        43%
        42.2
        NS.1720.004.NEBNext_dual_i7_F1---NEBNext_dual_i5_F1.58_R2
        80.3%
        44%
        42.2
        NS.1720.004.NEBNext_dual_i7_F2---NEBNext_dual_i5_F2.66_R1
        77.1%
        45%
        37.4
        NS.1720.004.NEBNext_dual_i7_F2---NEBNext_dual_i5_F2.66_R2
        78.6%
        45%
        37.4
        NS.1720.004.NEBNext_dual_i7_G1---NEBNext_dual_i5_G1.59_R1
        79.2%
        44%
        36.8
        NS.1720.004.NEBNext_dual_i7_G1---NEBNext_dual_i5_G1.59_R2
        79.9%
        45%
        36.8
        NS.1720.004.NEBNext_dual_i7_G2---NEBNext_dual_i5_G2.67_R1
        77.0%
        45%
        34.8
        NS.1720.004.NEBNext_dual_i7_G2---NEBNext_dual_i5_G2.67_R2
        78.6%
        46%
        34.8
        NS.1720.004.NEBNext_dual_i7_G4---NEBNext_dual_i5_G4.83_R1
        76.3%
        44%
        40.3
        NS.1720.004.NEBNext_dual_i7_G4---NEBNext_dual_i5_G4.83_R2
        76.8%
        45%
        40.3
        NS.1720.004.NEBNext_dual_i7_G8---NEBNext_dual_i5_G8.115_R1
        79.3%
        43%
        41.0
        NS.1720.004.NEBNext_dual_i7_G8---NEBNext_dual_i5_G8.115_R2
        80.1%
        45%
        41.0
        NS.1720.004.NEBNext_dual_i7_H1---NEBNext_dual_i5_H1.60_R1
        77.4%
        45%
        40.2
        NS.1720.004.NEBNext_dual_i7_H1---NEBNext_dual_i5_H1.60_R2
        78.5%
        45%
        40.2
        NS.1720.004.NEBNext_dual_i7_H2---NEBNext_dual_i5_H2.68_R1
        77.1%
        46%
        37.8
        NS.1720.004.NEBNext_dual_i7_H2---NEBNext_dual_i5_H2.68_R2
        78.0%
        47%
        37.8
        NS.1722.002.NEBNext_dual_i7_A10---NEBNext_dual_i5_A10.125_R1
        77.7%
        44%
        40.3
        NS.1722.002.NEBNext_dual_i7_A10---NEBNext_dual_i5_A10.125_R2
        78.8%
        45%
        40.3
        NS.1722.002.NEBNext_dual_i7_A11---NEBNext_dual_i5_A11.133_R1
        79.1%
        44%
        40.7
        NS.1722.002.NEBNext_dual_i7_A11---NEBNext_dual_i5_A11.133_R2
        79.8%
        44%
        40.7
        NS.1722.002.NEBNext_dual_i7_A12---NEBNext_dual_i5_A12.141_R1
        79.5%
        44%
        40.5
        NS.1722.002.NEBNext_dual_i7_A12---NEBNext_dual_i5_A12.141_R2
        79.8%
        44%
        40.5
        NS.1722.002.NEBNext_dual_i7_A4---NEBNext_dual_i5_A4.77_R1
        77.0%
        45%
        44.5
        NS.1722.002.NEBNext_dual_i7_A4---NEBNext_dual_i5_A4.77_R2
        78.2%
        45%
        44.5
        NS.1722.002.NEBNext_dual_i7_A5---NEBNext_dual_i5_A5.85_R1
        79.6%
        43%
        42.9
        NS.1722.002.NEBNext_dual_i7_A5---NEBNext_dual_i5_A5.85_R2
        80.1%
        44%
        42.9
        NS.1722.002.NEBNext_dual_i7_A6---NEBNext_dual_i5_A6.93_R1
        81.1%
        44%
        42.5
        NS.1722.002.NEBNext_dual_i7_A6---NEBNext_dual_i5_A6.93_R2
        81.7%
        45%
        42.5
        NS.1722.002.NEBNext_dual_i7_A7---NEBNext_dual_i5_A7.101_R1
        79.6%
        46%
        43.7
        NS.1722.002.NEBNext_dual_i7_A7---NEBNext_dual_i5_A7.101_R2
        80.7%
        46%
        43.7
        NS.1722.002.NEBNext_dual_i7_A8---NEBNext_dual_i5_A8.109_R1
        79.3%
        43%
        41.9
        NS.1722.002.NEBNext_dual_i7_A8---NEBNext_dual_i5_A8.109_R2
        79.8%
        44%
        41.9
        NS.1722.002.NEBNext_dual_i7_A9---NEBNext_dual_i5_A9.117_R1
        78.9%
        45%
        41.2
        NS.1722.002.NEBNext_dual_i7_A9---NEBNext_dual_i5_A9.117_R2
        79.7%
        46%
        41.2
        NS.1722.002.NEBNext_dual_i7_B10---NEBNext_dual_i5_B10.126_R1
        76.5%
        45%
        42.1
        NS.1722.002.NEBNext_dual_i7_B10---NEBNext_dual_i5_B10.126_R2
        76.3%
        45%
        42.1
        NS.1722.002.NEBNext_dual_i7_B11---NEBNext_dual_i5_B11.134_R1
        80.2%
        43%
        49.4
        NS.1722.002.NEBNext_dual_i7_B11---NEBNext_dual_i5_B11.134_R2
        81.1%
        44%
        49.4
        NS.1722.002.NEBNext_dual_i7_B12---NEBNext_dual_i5_B12.142_R1
        82.5%
        43%
        60.3
        NS.1722.002.NEBNext_dual_i7_B12---NEBNext_dual_i5_B12.142_R2
        83.1%
        44%
        60.3
        NS.1722.002.NEBNext_dual_i7_B4---NEBNext_dual_i5_B4.78_R1
        78.8%
        44%
        41.3
        NS.1722.002.NEBNext_dual_i7_B4---NEBNext_dual_i5_B4.78_R2
        80.1%
        45%
        41.3
        NS.1722.002.NEBNext_dual_i7_B5---NEBNext_dual_i5_B5.86_R1
        78.9%
        43%
        44.5
        NS.1722.002.NEBNext_dual_i7_B5---NEBNext_dual_i5_B5.86_R2
        79.8%
        44%
        44.5
        NS.1722.002.NEBNext_dual_i7_B6---NEBNext_dual_i5_B6.94_R1
        78.9%
        44%
        47.1
        NS.1722.002.NEBNext_dual_i7_B6---NEBNext_dual_i5_B6.94_R2
        80.1%
        44%
        47.1
        NS.1722.002.NEBNext_dual_i7_B7---NEBNext_dual_i5_B7.102_R1
        80.7%
        44%
        39.2
        NS.1722.002.NEBNext_dual_i7_B7---NEBNext_dual_i5_B7.102_R2
        81.5%
        45%
        39.2
        NS.1722.002.NEBNext_dual_i7_B8---NEBNext_dual_i5_B8.110_R1
        78.5%
        44%
        40.1
        NS.1722.002.NEBNext_dual_i7_B8---NEBNext_dual_i5_B8.110_R2
        79.5%
        44%
        40.1
        NS.1722.002.NEBNext_dual_i7_B9---NEBNext_dual_i5_B9.118_R1
        81.7%
        45%
        47.0
        NS.1722.002.NEBNext_dual_i7_B9---NEBNext_dual_i5_B9.118_R2
        82.5%
        46%
        47.0
        NS.1722.002.NEBNext_dual_i7_C10---NEBNext_dual_i5_C10.127_R1
        78.9%
        43%
        37.0
        NS.1722.002.NEBNext_dual_i7_C10---NEBNext_dual_i5_C10.127_R2
        79.6%
        44%
        37.0
        NS.1722.002.NEBNext_dual_i7_C11---NEBNext_dual_i5_C11.135_R1
        79.5%
        42%
        37.7
        NS.1722.002.NEBNext_dual_i7_C11---NEBNext_dual_i5_C11.135_R2
        80.3%
        43%
        37.7
        NS.1722.002.NEBNext_dual_i7_C12---NEBNext_dual_i5_C12.143_R1
        78.8%
        44%
        38.1
        NS.1722.002.NEBNext_dual_i7_C12---NEBNext_dual_i5_C12.143_R2
        79.7%
        45%
        38.1
        NS.1722.002.NEBNext_dual_i7_C4---NEBNext_dual_i5_C4.79_R1
        78.3%
        44%
        39.4
        NS.1722.002.NEBNext_dual_i7_C4---NEBNext_dual_i5_C4.79_R2
        79.9%
        45%
        39.4
        NS.1722.002.NEBNext_dual_i7_C5---NEBNext_dual_i5_C5.87_R1
        80.6%
        42%
        49.6
        NS.1722.002.NEBNext_dual_i7_C5---NEBNext_dual_i5_C5.87_R2
        81.5%
        42%
        49.6
        NS.1722.002.NEBNext_dual_i7_C6---NEBNext_dual_i5_C6.95_R1
        78.7%
        44%
        42.2
        NS.1722.002.NEBNext_dual_i7_C6---NEBNext_dual_i5_C6.95_R2
        80.1%
        45%
        42.2
        NS.1722.002.NEBNext_dual_i7_C7---NEBNext_dual_i5_C7.103_R1
        82.3%
        45%
        54.9
        NS.1722.002.NEBNext_dual_i7_C7---NEBNext_dual_i5_C7.103_R2
        83.2%
        46%
        54.9
        NS.1722.002.NEBNext_dual_i7_C8---NEBNext_dual_i5_C8.111_R1
        81.1%
        43%
        38.7
        NS.1722.002.NEBNext_dual_i7_C8---NEBNext_dual_i5_C8.111_R2
        82.0%
        45%
        38.7
        NS.1722.002.NEBNext_dual_i7_C9---NEBNext_dual_i5_C9.119_R1
        81.4%
        43%
        42.6
        NS.1722.002.NEBNext_dual_i7_C9---NEBNext_dual_i5_C9.119_R2
        82.4%
        44%
        42.6
        NS.1722.002.NEBNext_dual_i7_D10---NEBNext_dual_i5_D10.128_R1
        77.0%
        44%
        35.7
        NS.1722.002.NEBNext_dual_i7_D10---NEBNext_dual_i5_D10.128_R2
        78.3%
        45%
        35.7
        NS.1722.002.NEBNext_dual_i7_D11---NEBNext_dual_i5_D11.136_R1
        79.4%
        43%
        39.7
        NS.1722.002.NEBNext_dual_i7_D11---NEBNext_dual_i5_D11.136_R2
        80.5%
        44%
        39.7
        NS.1722.002.NEBNext_dual_i7_D12---NEBNext_dual_i5_D12.144_R1
        80.1%
        43%
        41.8
        NS.1722.002.NEBNext_dual_i7_D12---NEBNext_dual_i5_D12.144_R2
        80.3%
        44%
        41.8
        NS.1722.002.NEBNext_dual_i7_D3---NEBNext_dual_i5_D3.72_R1
        79.2%
        46%
        42.8
        NS.1722.002.NEBNext_dual_i7_D3---NEBNext_dual_i5_D3.72_R2
        80.5%
        47%
        42.8
        NS.1722.002.NEBNext_dual_i7_D4---NEBNext_dual_i5_D4.80_R1
        78.7%
        44%
        47.2
        NS.1722.002.NEBNext_dual_i7_D4---NEBNext_dual_i5_D4.80_R2
        80.5%
        45%
        47.2
        NS.1722.002.NEBNext_dual_i7_D5---NEBNext_dual_i5_D5.88_R1
        78.5%
        44%
        50.1
        NS.1722.002.NEBNext_dual_i7_D5---NEBNext_dual_i5_D5.88_R2
        79.1%
        45%
        50.1
        NS.1722.002.NEBNext_dual_i7_D6---NEBNext_dual_i5_D6.96_R1
        78.2%
        43%
        40.6
        NS.1722.002.NEBNext_dual_i7_D6---NEBNext_dual_i5_D6.96_R2
        79.3%
        44%
        40.6
        NS.1722.002.NEBNext_dual_i7_D7---NEBNext_dual_i5_D7.104_R1
        80.7%
        45%
        42.9
        NS.1722.002.NEBNext_dual_i7_D7---NEBNext_dual_i5_D7.104_R2
        81.7%
        46%
        42.9
        NS.1722.002.NEBNext_dual_i7_D8---NEBNext_dual_i5_D8.112_R1
        81.3%
        44%
        45.1
        NS.1722.002.NEBNext_dual_i7_D8---NEBNext_dual_i5_D8.112_R2
        82.3%
        45%
        45.1
        NS.1722.002.NEBNext_dual_i7_D9---NEBNext_dual_i5_D9.120_R1
        82.5%
        44%
        46.8
        NS.1722.002.NEBNext_dual_i7_D9---NEBNext_dual_i5_D9.120_R2
        83.3%
        45%
        46.8
        NS.1722.002.NEBNext_dual_i7_E10---NEBNext_dual_i5_E10.129_R1
        76.8%
        45%
        40.8
        NS.1722.002.NEBNext_dual_i7_E10---NEBNext_dual_i5_E10.129_R2
        78.4%
        46%
        40.8
        NS.1722.002.NEBNext_dual_i7_E11---NEBNext_dual_i5_E11.137_R1
        82.3%
        42%
        45.2
        NS.1722.002.NEBNext_dual_i7_E11---NEBNext_dual_i5_E11.137_R2
        83.0%
        43%
        45.2
        NS.1722.002.NEBNext_dual_i7_E3---NEBNext_dual_i5_E3.73_R1
        76.8%
        43%
        39.4
        NS.1722.002.NEBNext_dual_i7_E3---NEBNext_dual_i5_E3.73_R2
        78.2%
        44%
        39.4
        NS.1722.002.NEBNext_dual_i7_E4---NEBNext_dual_i5_E4.81_R1
        78.7%
        45%
        45.7
        NS.1722.002.NEBNext_dual_i7_E4---NEBNext_dual_i5_E4.81_R2
        80.1%
        45%
        45.7
        NS.1722.002.NEBNext_dual_i7_E5---NEBNext_dual_i5_E5.89_R1
        79.7%
        44%
        42.2
        NS.1722.002.NEBNext_dual_i7_E5---NEBNext_dual_i5_E5.89_R2
        80.8%
        45%
        42.2
        NS.1722.002.NEBNext_dual_i7_E6---NEBNext_dual_i5_E6.97_R1
        79.7%
        43%
        43.8
        NS.1722.002.NEBNext_dual_i7_E6---NEBNext_dual_i5_E6.97_R2
        80.5%
        44%
        43.8
        NS.1722.002.NEBNext_dual_i7_E7---NEBNext_dual_i5_E7.105_R1
        80.4%
        45%
        40.1
        NS.1722.002.NEBNext_dual_i7_E7---NEBNext_dual_i5_E7.105_R2
        81.7%
        46%
        40.1
        NS.1722.002.NEBNext_dual_i7_E8---NEBNext_dual_i5_E8.113_R1
        80.7%
        44%
        45.6
        NS.1722.002.NEBNext_dual_i7_E8---NEBNext_dual_i5_E8.113_R2
        81.9%
        45%
        45.6
        NS.1722.002.NEBNext_dual_i7_E9---NEBNext_dual_i5_E9.121_R1
        78.1%
        42%
        38.5
        NS.1722.002.NEBNext_dual_i7_E9---NEBNext_dual_i5_E9.121_R2
        79.4%
        43%
        38.5
        NS.1722.002.NEBNext_dual_i7_F10---NEBNext_dual_i5_F10.130_R1
        78.8%
        43%
        37.0
        NS.1722.002.NEBNext_dual_i7_F10---NEBNext_dual_i5_F10.130_R2
        80.1%
        43%
        37.0
        NS.1722.002.NEBNext_dual_i7_F11---NEBNext_dual_i5_F11.138_R1
        76.4%
        45%
        43.7
        NS.1722.002.NEBNext_dual_i7_F11---NEBNext_dual_i5_F11.138_R2
        78.0%
        45%
        43.7
        NS.1722.002.NEBNext_dual_i7_F3---NEBNext_dual_i5_F3.74_R1
        78.3%
        43%
        39.3
        NS.1722.002.NEBNext_dual_i7_F3---NEBNext_dual_i5_F3.74_R2
        79.5%
        44%
        39.3
        NS.1722.002.NEBNext_dual_i7_F4---NEBNext_dual_i5_F4.82_R1
        81.4%
        41%
        43.7
        NS.1722.002.NEBNext_dual_i7_F4---NEBNext_dual_i5_F4.82_R2
        82.5%
        43%
        43.7
        NS.1722.002.NEBNext_dual_i7_F5---NEBNext_dual_i5_F5.90_R1
        79.4%
        44%
        42.3
        NS.1722.002.NEBNext_dual_i7_F5---NEBNext_dual_i5_F5.90_R2
        80.8%
        44%
        42.3
        NS.1722.002.NEBNext_dual_i7_F6---NEBNext_dual_i5_F6.98_R1
        81.4%
        44%
        46.7
        NS.1722.002.NEBNext_dual_i7_F6---NEBNext_dual_i5_F6.98_R2
        82.8%
        45%
        46.7
        NS.1722.002.NEBNext_dual_i7_F7---NEBNext_dual_i5_F7.106_R1
        80.9%
        45%
        46.9
        NS.1722.002.NEBNext_dual_i7_F7---NEBNext_dual_i5_F7.106_R2
        82.4%
        46%
        46.9
        NS.1722.002.NEBNext_dual_i7_F8---NEBNext_dual_i5_F8.114_R1
        81.2%
        43%
        43.6
        NS.1722.002.NEBNext_dual_i7_F8---NEBNext_dual_i5_F8.114_R2
        82.4%
        44%
        43.6
        NS.1722.002.NEBNext_dual_i7_F9---NEBNext_dual_i5_F9.122_R1
        80.4%
        43%
        46.0
        NS.1722.002.NEBNext_dual_i7_F9---NEBNext_dual_i5_F9.122_R2
        81.2%
        44%
        46.0
        NS.1722.002.NEBNext_dual_i7_G10---NEBNext_dual_i5_G10.131_R1
        77.2%
        44%
        41.2
        NS.1722.002.NEBNext_dual_i7_G10---NEBNext_dual_i5_G10.131_R2
        78.2%
        45%
        41.2
        NS.1722.002.NEBNext_dual_i7_G11---NEBNext_dual_i5_G11.139_R1
        78.4%
        44%
        39.8
        NS.1722.002.NEBNext_dual_i7_G11---NEBNext_dual_i5_G11.139_R2
        79.9%
        45%
        39.8
        NS.1722.002.NEBNext_dual_i7_G3---NEBNext_dual_i5_G3.75_R1
        77.4%
        42%
        38.0
        NS.1722.002.NEBNext_dual_i7_G3---NEBNext_dual_i5_G3.75_R2
        78.4%
        43%
        38.0
        NS.1722.002.NEBNext_dual_i7_G5---NEBNext_dual_i5_G5.91_R1
        82.1%
        43%
        50.9
        NS.1722.002.NEBNext_dual_i7_G5---NEBNext_dual_i5_G5.91_R2
        83.2%
        44%
        50.9
        NS.1722.002.NEBNext_dual_i7_G6---NEBNext_dual_i5_G6.99_R1
        78.3%
        45%
        40.3
        NS.1722.002.NEBNext_dual_i7_G6---NEBNext_dual_i5_G6.99_R2
        79.8%
        46%
        40.3
        NS.1722.002.NEBNext_dual_i7_G7---NEBNext_dual_i5_G7.107_R1
        82.7%
        44%
        46.4
        NS.1722.002.NEBNext_dual_i7_G7---NEBNext_dual_i5_G7.107_R2
        83.8%
        45%
        46.4
        NS.1722.002.NEBNext_dual_i7_G9---NEBNext_dual_i5_G9.123_R1
        78.6%
        43%
        44.5
        NS.1722.002.NEBNext_dual_i7_G9---NEBNext_dual_i5_G9.123_R2
        79.5%
        43%
        44.5
        NS.1722.002.NEBNext_dual_i7_H10---NEBNext_dual_i5_H10.132_R1
        81.0%
        43%
        54.2
        NS.1722.002.NEBNext_dual_i7_H10---NEBNext_dual_i5_H10.132_R2
        82.1%
        44%
        54.2
        NS.1722.002.NEBNext_dual_i7_H11---NEBNext_dual_i5_H11.140_R1
        81.7%
        43%
        47.2
        NS.1722.002.NEBNext_dual_i7_H11---NEBNext_dual_i5_H11.140_R2
        82.5%
        43%
        47.2
        NS.1722.002.NEBNext_dual_i7_H3---NEBNext_dual_i5_H3.76_R1
        76.3%
        44%
        36.7
        NS.1722.002.NEBNext_dual_i7_H3---NEBNext_dual_i5_H3.76_R2
        77.7%
        44%
        36.7
        NS.1722.002.NEBNext_dual_i7_H4---NEBNext_dual_i5_H4.84_R1
        78.4%
        43%
        44.2
        NS.1722.002.NEBNext_dual_i7_H4---NEBNext_dual_i5_H4.84_R2
        79.6%
        44%
        44.2
        NS.1722.002.NEBNext_dual_i7_H5---NEBNext_dual_i5_H5.92_R1
        84.9%
        40%
        45.0
        NS.1722.002.NEBNext_dual_i7_H5---NEBNext_dual_i5_H5.92_R2
        85.4%
        40%
        45.0
        NS.1722.002.NEBNext_dual_i7_H6---NEBNext_dual_i5_H6.100_R1
        82.7%
        44%
        42.9
        NS.1722.002.NEBNext_dual_i7_H6---NEBNext_dual_i5_H6.100_R2
        83.4%
        45%
        42.9
        NS.1722.002.NEBNext_dual_i7_H7---NEBNext_dual_i5_H7.108_R1
        79.2%
        45%
        42.7
        NS.1722.002.NEBNext_dual_i7_H7---NEBNext_dual_i5_H7.108_R2
        79.8%
        46%
        42.7
        NS.1722.002.NEBNext_dual_i7_H8---NEBNext_dual_i5_H8.116_R1
        80.9%
        44%
        43.0
        NS.1722.002.NEBNext_dual_i7_H8---NEBNext_dual_i5_H8.116_R2
        82.0%
        45%
        43.0
        NS.1722.002.NEBNext_dual_i7_H9---NEBNext_dual_i5_H9.124_R1
        80.0%
        43%
        42.6
        NS.1722.002.NEBNext_dual_i7_H9---NEBNext_dual_i5_H9.124_R2
        79.7%
        44%
        42.6

        FastQC

        FastQC is a quality control tool for high throughput sequence data, written by Simon Andrews at the Babraham Institute in Cambridge.

        Sequence Counts

        Sequence counts for each sample. Duplicate read counts are an estimate only.

        This plot show the total number of reads, broken down into unique and duplicate if possible (only more recent versions of FastQC give duplicate info).

        You can read more about duplicate calculation in the FastQC documentation. A small part has been copied here for convenience:

        Only sequences which first appear in the first 100,000 sequences in each file are analysed. This should be enough to get a good impression for the duplication levels in the whole file. Each sequence is tracked to the end of the file to give a representative count of the overall duplication level.

        The duplication detection requires an exact sequence match over the whole length of the sequence. Any reads over 75bp in length are truncated to 50bp for this analysis.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Quality Histograms

        The mean quality value across each base position in the read.

        To enable multiple samples to be plotted on the same graph, only the mean quality scores are plotted (unlike the box plots seen in FastQC reports).

        Taken from the FastQC help:

        The y-axis on the graph shows the quality scores. The higher the score, the better the base call. The background of the graph divides the y axis into very good quality calls (green), calls of reasonable quality (orange), and calls of poor quality (red). The quality of calls on most platforms will degrade as the run progresses, so it is common to see base calls falling into the orange area towards the end of a read.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Sequence Quality Scores

        The number of reads with average quality scores. Shows if a subset of reads has poor quality.

        From the FastQC help:

        The per sequence quality score report allows you to see if a subset of your sequences have universally low quality values. It is often the case that a subset of sequences will have universally poor quality, however these should represent only a small percentage of the total sequences.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base Sequence Content

        The proportion of each base position for which each of the four normal DNA bases has been called.

        To enable multiple samples to be shown in a single plot, the base composition data is shown as a heatmap. The colours represent the balance between the four bases: an even distribution should give an even muddy brown colour. Hover over the plot to see the percentage of the four bases under the cursor.

        To see the data as a line plot, as in the original FastQC graph, click on a sample track.

        From the FastQC help:

        Per Base Sequence Content plots out the proportion of each base position in a file for which each of the four normal DNA bases has been called.

        In a random library you would expect that there would be little to no difference between the different bases of a sequence run, so the lines in this plot should run parallel with each other. The relative amount of each base should reflect the overall amount of these bases in your genome, but in any case they should not be hugely imbalanced from each other.

        It's worth noting that some types of library will always produce biased sequence composition, normally at the start of the read. Libraries produced by priming using random hexamers (including nearly all RNA-Seq libraries) and those which were fragmented using transposases inherit an intrinsic bias in the positions at which reads start. This bias does not concern an absolute sequence, but instead provides enrichement of a number of different K-mers at the 5' end of the reads. Whilst this is a true technical bias, it isn't something which can be corrected by trimming and in most cases doesn't seem to adversely affect the downstream analysis.

        Click a sample row to see a line plot for that dataset.
        Rollover for sample name
        Position: -
        %T: -
        %C: -
        %A: -
        %G: -

        Per Sequence GC Content

        The average GC content of reads. Normal random library typically have a roughly normal distribution of GC content.

        From the FastQC help:

        This module measures the GC content across the whole length of each sequence in a file and compares it to a modelled normal distribution of GC content.

        In a normal random library you would expect to see a roughly normal distribution of GC content where the central peak corresponds to the overall GC content of the underlying genome. Since we don't know the the GC content of the genome the modal GC content is calculated from the observed data and used to build a reference distribution.

        An unusually shaped distribution could indicate a contaminated library or some other kinds of biased subset. A normal distribution which is shifted indicates some systematic bias which is independent of base position. If there is a systematic bias which creates a shifted normal distribution then this won't be flagged as an error by the module since it doesn't know what your genome's GC content should be.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Per Base N Content

        The percentage of base calls at each position for which an N was called.

        From the FastQC help:

        If a sequencer is unable to make a base call with sufficient confidence then it will normally substitute an N rather than a conventional base call. This graph shows the percentage of base calls at each position for which an N was called.

        It's not unusual to see a very low proportion of Ns appearing in a sequence, especially nearer the end of a sequence. However, if this proportion rises above a few percent it suggests that the analysis pipeline was unable to interpret the data well enough to make valid base calls.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Sequence Length Distribution

        All samples have sequences of a single length (101bp).

        Sequence Duplication Levels

        The relative level of duplication found for every sequence.

        From the FastQC Help:

        In a diverse library most sequences will occur only once in the final set. A low level of duplication may indicate a very high level of coverage of the target sequence, but a high level of duplication is more likely to indicate some kind of enrichment bias (eg PCR over amplification). This graph shows the degree of duplication for every sequence in a library: the relative number of sequences with different degrees of duplication.

        Only sequences which first appear in the first 100,000 sequences in each file are analysed. This should be enough to get a good impression for the duplication levels in the whole file. Each sequence is tracked to the end of the file to give a representative count of the overall duplication level.

        The duplication detection requires an exact sequence match over the whole length of the sequence. Any reads over 75bp in length are truncated to 50bp for this analysis.

        In a properly diverse library most sequences should fall into the far left of the plot in both the red and blue lines. A general level of enrichment, indicating broad oversequencing in the library will tend to flatten the lines, lowering the low end and generally raising other categories. More specific enrichments of subsets, or the presence of low complexity contaminants will tend to produce spikes towards the right of the plot.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Overrepresented sequences

        The total amount of overrepresented sequences found in each library.

        FastQC calculates and lists overrepresented sequences in FastQ files. It would not be possible to show this for all samples in a MultiQC report, so instead this plot shows the number of sequences categorized as over represented.

        Sometimes, a single sequence may account for a large number of reads in a dataset. To show this, the bars are split into two: the first shows the overrepresented reads that come from the single most common sequence. The second shows the total count from all remaining overrepresented sequences.

        From the FastQC Help:

        A normal high-throughput library will contain a diverse set of sequences, with no individual sequence making up a tiny fraction of the whole. Finding that a single sequence is very overrepresented in the set either means that it is highly biologically significant, or indicates that the library is contaminated, or not as diverse as you expected.

        FastQC lists all of the sequences which make up more than 0.1% of the total. To conserve memory only sequences which appear in the first 100,000 sequences are tracked to the end of the file. It is therefore possible that a sequence which is overrepresented but doesn't appear at the start of the file for some reason could be missed by this module.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Adapter Content

        The cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position.

        Note that only samples with ≥ 0.1% adapter contamination are shown.

        There may be several lines per sample, as one is shown for each adapter detected in the file.

        From the FastQC Help:

        The plot shows a cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position. Once a sequence has been seen in a read it is counted as being present right through to the end of the read so the percentages you see will only increase as the read length goes on.

        Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).


        Status Checks

        Status for each FastQC section showing whether results seem entirely normal (green), slightly abnormal (orange) or very unusual (red).

        FastQC assigns a status for each section of the report. These give a quick evaluation of whether the results of the analysis seem entirely normal (green), slightly abnormal (orange) or very unusual (red).

        It is important to stress that although the analysis results appear to give a pass/fail result, these evaluations must be taken in the context of what you expect from your library. A 'normal' sample as far as FastQC is concerned is random and diverse. Some experiments may be expected to produce libraries which are biased in particular ways. You should treat the summary evaluations therefore as pointers to where you should concentrate your attention and understand why your library may not look random and diverse.

        Specific guidance on how to interpret the output of each module can be found in the relevant report section, or in the FastQC help.

        In this heatmap, we summarise all of these into a single heatmap for a quick overview. Note that not all FastQC sections have plots in MultiQC reports, but all status checks are shown in this heatmap.

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